References
Altwegg R, Anderson MD. 2009. Rainfall in arid zones: Possible effects of climate change on the population ecology of blue cranes. Functional Ecology 23:1014–1021. DOI: 10.1111/j.1365-2435.2009.01563.x.
Altwegg R, Doutrelant C, Anderson MD, Spottiswoode CN, Covas R. 2014. Climate, social factors and research disturbance influence population dynamics in a declining sociable weaver metapopulation. Oecologia 174:413–425. DOI: 10.1007/s00442-013-2768-7.
Balme GA, Lindsey PA, Swanepoel LH, Hunter LTB. 2014. Failure of research to address the rangewide conservation needs of large carnivores: Leopards in South Africa as a case study. Conservation Letters 7:3–11. DOI: 10.1111/conl.12028.
Bartram I, Jeschke JM. 2019. Do cancer stem cells exist? A pilot study combining a systematic review with the hierarchy-of-hypotheses approach. PLOS ONE 14:e0225898. DOI: 10.1371/journal.pone.0225898.
Bishop PJ, Cuff AR, Hutchinson JR. 2021. How to build a dinosaur: Musculoskeletal modeling and simulation of locomotor biomechanics in extinct animals. Paleobiology 47:1–38. DOI: 10.1017/pab.2020.46.
Bishop PJ, Falisse A, De Groote F, Hutchinson JR. 2021a. Predictive simulations of running gait reveal a critical dynamic role for the tail in bipedal dinosaur locomotion. Science Advances 7:eabi7348. DOI: 10.1126/sciadv.abi7348.
Bishop PJ, Falisse A, De Groote F, Hutchinson JR. 2021b. Predictive simulations of musculoskeletal function and Jumping performance in a generalized bird. Integrative Organismal Biology 3. DOI: 10.1093/iob/obab006.
Bishop PJ, Michel KB, Falisse A, Cuff AR, Allen VR, Groote FD, Hutchinson JR. 2021c. Computational modelling of muscle fibre operating ranges in the hindlimb of a small ground bird (Eudromia Elegans), with implications for modelling locomotion in extinct species. PLOS Computational Biology 17:e1008843. DOI: 10.1371/journal.pcbi.1008843.
Blackburn TM, Cassey P, Duncan RP, Evans KL, Gaston KJ. 2004. Avian Extinction and Mammalian Introductions on Oceanic Islands. Science 305:1955–1958. DOI: 10.1126/science.1101617.
Blackburn TM, Duncan RP. 2001a. Establishment patterns of exotic birds are constrained by non-random patterns in introduction. Journal of Biogeography 28:927–939. DOI: 10.1046/j.1365-2699.2001.00597.x.
Blackburn TM, Duncan RP. 2001b. Determinants of establishment success in introduced birds. Nature 414:195–197. DOI: 10.1038/35102557.
Blackburn TM, Gaston KJ. 1994. Animal body size distributions: Patterns, mechanisms and implications. Trends in Ecology & Evolution 9:471–474. DOI: 10.1016/0169-5347(94)90311-5.
Blackburn TM, Harvey PH, Pagel MD. 1990. Species Number, Population Density and Body Size Relationships in Natural Communities. Journal of Animal Ecology 59:335–345. DOI: 10.2307/5176.
Bocage JVB du. 1873. Mélanges erpétologiques. II. Sur quelques reptiles et batraciens nouveaux, rares ou peu connus d’Afrique occidentale. Jornal de Sciencias Mathematicas, Physicas e Naturaes 4:209–227.
Boumis RJ, Ferry LA, Pace CM, Gibb AC. 2014. Heads or Tails: Do Stranded Fish (Mosquitofish, Gambusia affinis) Know Where They Are on a Slope and How to Return to the Water? PLOS ONE 9:e104569. DOI: 10.1371/journal.pone.0104569.
Braga RR, Gómez-Aparicio L, Heger T, Vitule JRS, Jeschke JM. 2018. Structuring evidence for invasional meltdown: Broad support but with biases and gaps. Biological Invasions 20:923–936. DOI: 10.1007/s10530-017-1582-2.
Bugir CK, Butynski TM, Hayward MW. 2021. Prey preferences of the chimpanzee (Pan Troglodytes). Ecology and Evolution 11:7138–7146. DOI: 10.1002/ece3.7633.
Bugir CK, Peres CA, White KS, Montgomery RA, Griffin AS, Rippon P, Clulow J, Hayward MW. 2021. Prey preferences of modern human hunter-gatherers. Food Webs 26:e00183. DOI: 10.1016/j.fooweb.2020.e00183.
Cassey P. 2001. Determining Variation in the Success of New Zealand Land Birds. Global Ecology and Biogeography 10:161–172.
Cassey P, Blackburn TM. 2003. Publication rejection among ecologists. Trends in Ecology & Evolution 18:375–376. DOI: 10.1016/S0169-5347(03)00160-5.
Cassey P, Blackburn TM. 2004. Publication and Rejection among Successful Ecologists. BioScience 54:234–239. DOI: 10.1641/0006-3568(2004)054[0234:PARASE]2.0.CO;2.
Cassey P, McArdle BH. 1999. An assessment of distance sampling techniques for estimating animal abundance. Environmetrics 10:261–278. DOI: 10.1002/(SICI)1099-095X(199905/06)10:3<261::AID-ENV351>3.0.CO;2-O.
Cassey P, Ussher GT. 1999. Estimating abundance of tuatara. Biological Conservation 88:361–366. DOI: 10.1016/S0006-3207(98)00114-1.
D’Andrea R, O’Dwyer JP. 2017. Can editors save peer review from peer reviewers? PLOS ONE 12:e0186111. DOI: 10.1371/journal.pone.0186111.
Darwin C. 1859. On the origin of species. London: John Murray.
De Queiroz A. 2014. The monkey’s voyage: How improbable journeys shaped the history of life. Basic Books (AZ).
Ferreira SM, Hofmeyr M. 2014. Managing charismatic carnivores in small areas: Large felids in South Africa. South African Journal of Wildlife Research 44:32–42. DOI: 10.3957/056.044.0102.
Fox J. 2011.Zombie ideas in ecology. Available at https://oikosjournal.wordpress.com/2011/06/17/zombie-ideas-in-ecology/ (accessed November 14, 2021).
Gaston KJ, Blackburn TM (eds.). 2000. Pattern and Process in Macroecology. Wiley Online Books. DOI: 10.1002/9780470999592.
Haag WR. 2012. North American freshwater mussels: Natural history, ecology, and conservation. Cambridge University Press.
Hayward MW, Hayward GJ, Druce DJ, Kerley GIH. 2008. Do fences constrain predator movements on an evolutionary scale? Home range, food intake and movement patterns of large predators reintroduced to Addo Elephant National Park, South Africa. Biodiversity and Conservation 18:887. DOI: 10.1007/s10531-008-9452-y.
Hayward MW, Hayward GJ, Tambling CJ, Kerley GIH. 2011. Do lions Panthera Leo actively select prey or do prey preferences simply reflect chance responses via evolutionary adaptations to optimal foraging? PLOS ONE 6:e23607. DOI: 10.1371/journal.pone.0023607.
Hayward MW, Henschel P, O’Brien J, Hofmeyr M, Balme G, Kerley GIH. 2006a. Prey preferences of the leopard (Panthera Pardus). Journal of Zoology 270:298–313. DOI: 10.1111/j.1469-7998.2006.00139.x.
Hayward MW, Hofmeyr M, O’Brien J, Kerley GIH. 2006b. Prey preferences of the cheetah (Acinonyx Jubatus) (Felidae: Carnivora): Morphological limitations or the need to capture rapidly consumable prey before kleptoparasites arrive? Journal of Zoology 270:615–627. DOI: 10.1111/j.1469-7998.2006.00184.x.
Hayward MW, Jędrzejewski W, Jêdrzejewska B. 2012. Prey preferences of the tiger Panthera Tigris. Journal of Zoology 286:221–231. DOI: 10.1111/j.1469-7998.2011.00871.x.
Hayward MW, Kamler JF, Montgomery RA, Newlove A, Rostro-García S, Sales LP, Van Valkenburgh B. 2016. Prey preferences of the Jaguar Panthera Onca reflect the post-Pleistocene demise of large prey. Frontiers in Ecology and Evolution 3:148. DOI: 10.3389/fevo.2015.00148.
Hayward MW, Kerley GIH. 2005. Prey preferences of the lion (Panthera Leo). Journal of Zoology 267:309–322. DOI: 10.1017/S0952836905007508.
Hayward MW, Kerley GIH. 2008. Prey preferences and dietary overlap amongst Africa’s large predators. South African Journal of Wildlife Research 38:93–108. DOI: 10.3957/0379-4369-38.2.93.
Hayward MW, Kerley GIH, Adendorff J, Moolman LC, O’Brien J, Sholto-Douglas A, Bissett C, Bean P, Fogarty A, Howarth D, Slater R. 2007a. The reintroduction of large carnivores to the Eastern Cape, South Africa: An assessment. Oryx 41:205–214. DOI: 10.1017/S0030605307001767.
Hayward MW, Lyngdoh S, Habib B. 2014. Diet and prey preferences of dholes (Cuon Alpinus): Dietary competition within Asia’s apex predator guild. Journal of Zoology 294:255–266. DOI: 10.1111/jzo.12171.
Hayward MW, O’Brien J, Hofmeyr M, Kerley GIH. 2006c. Prey Preferences of the African Wild Dog Lycaon Pictus (Canidae: Carnivora): Ecological Requirements for Conservation. Journal of Mammalogy 87:1122–1131. DOI: 10.1644/05-MAMM-A-304R2.1.
Hayward MW, O’brien J, Hofmeyr M, Kerley GIH. 2007b. Testing Predictions of the Prey of Lion Derived From Modeled Prey Preferences. Journal of Wildlife Management 71:1567–1575. DOI: 10.2193/2006-264.
Hayward MW, O’Brien J, Kerley GIH. 2007. Carrying capacity of large African predators: Predictions and tests. Biological Conservation 139:219–229. DOI: 10.1016/j.biocon.2007.06.018.
Hayward MW, Porter L, Lanszki J, Kamler JF, Beck JM, Kerley GIH, Macdonald DW, Montgomery RA, Parker DM, Scott DM, O’Brien J, Yarnell RW. 2017. Factors affecting the prey preferences of jackals (Canidae). Mammalian Biology 85:70–82. DOI: 10.1016/j.mambio.2017.02.005.
Hayward MW, Porter L, Lanszki J, Kamler JF, Beck JM, Kerley GIH, Macdonald DW, Montgomery RA, Parker DM, Scott DM, O’Brien J, Yarnell RW. 2018. Prey preferences of the jackals - critical resources to explain their range expansion. In: Ginnatos G, Banea OC, Hatlauf J, Sillero-Zubiri C, Georgiadis C, Legakis A eds. Proceedings of the 2nd International Jackal Symposium. Attica, Greece: Marathon Bay, 52–53.
Heger T, Aguilar-Trigueros CA, Bartram I, Braga RR, Dietl GP, Enders M, Gibson DJ, Gómez-Aparicio L, Gras P, Jax K, Lokatis S, Lortie CJ, Mupepele A-C, Schindler S, Starrfelt J, Synodinos AD, Jeschke JM. 2021. The Hierarchy-of-Hypotheses Approach: A Synthesis Method for Enhancing Theory Development in Ecology and Evolution. BioScience 71:337–349. DOI: 10.1093/biosci/biaa130.
Heger T, Jeschke JM. 2014. The enemy release hypothesis as a hierarchy of hypotheses. Oikos 123:741–750. DOI: 10.1111/j.1600-0706.2013.01263.x.
Heger T, Pahl AT, Botta-Dukát Z, Gherardi F, Hoppe C, Hoste I, Jax K, Lindström L, Boets P, Haider S, Kollmann J, Wittmann MJ, Jeschke JM. 2013. Conceptual Frameworks and Methods for Advancing Invasion Ecology. AMBIO 42:527–540. DOI: 10.1007/s13280-012-0379-x.
Hochberg ME, Chase JM, Gotelli NJ, Hastings A, Naeem S. 2009. The tragedy of the reviewer commons*. Ecology Letters 12:2–4. DOI: 10.1111/j.1461-0248.2008.01276.x.
Hutchinson JR, Garcia M. 2002. Tyrannosaurus was not a fast runner. Nature 415:1018–1021. DOI: 10.1038/4151018a.
Jędrzejewski W, Niedziałkowska M, Hayward MW, Goszczyński J, Jędrzejewska B, Borowik T, Bartoń KA, Nowak S, Harmuszkiewicz J, Juszczyk A, Kałamarz T, Kloch A, Koniuch J, Kotiuk K, Mysłajek RW, Nędzyńska M, Olczyk A, Teleon M, Wojtulewicz M. 2012. Prey choice and diet of wolves related to ungulate communities and wolf subpopulations in Poland. Journal of Mammalogy 93:1480–1492. DOI: 10.1644/10-MAMM-A-132.1.
Jeschke JM, Aparicio LG, Haider S, Heger T, Lortie CJ, Pyšek P, Strayer DL. 2012a. Taxonomic bias and lack of cross-taxonomic studies in invasion biology. Frontiers in Ecology and the Environment 10:349–350. DOI: 10.1890/12.WB.016.
Jeschke J, Aparicio LG, Haider S, Heger T, Lortie C, Pyšek P, Strayer D. 2012b. Support for major hypotheses in invasion biology is uneven and declining. NeoBiota 14:1–20. DOI: 10.3897/neobiota.14.3435.
Jeschke JM, Heger T (eds.). 2018. Invasion biology: Hypotheses and evidence. Wallingford: CABI. DOI: 10.1079/9781780647647.0000.
Jeschke JM, Lokatis S, Bartram I, Tockner K. 2019. Knowledge in the dark: Scientific challenges and ways forward. FACETS 4:423–441. DOI: 10.1139/facets-2019-0007.
Jeschke JM, Pyšek P. 2018. Tens rule. In: Jeschke JM, Heger T eds. Invasion biology: Hypotheses and evidence. Wallingford: CABI, 124–132. DOI: 10.1079/9781780647647.0124.
Kaushal SS, Jeschke JM. 2013. Collegiality versus competition: How metrics shape scientific communities. BioScience 63:155–156. DOI: 10.1525/bio.2013.63.3.3.
Lajtha K, Baveye PC. 2010. How should we deal with the growing peer-review problem? Biogeochemistry 101:1–3. DOI: 10.1007/s10533-010-9530-6.
Lindenmayer DB, Zylstra P. 2024. Identifying and managing disturbance-stimulated flammability in woody ecosystems. Biological Reviews.
Lyngdoh S, Shrotriya S, Goyal SP, Clements H, Hayward MW, Habib B. 2014. Prey preferences of the Snow Leopard (Panthera Uncia): Regional diet specificity holds global significance for conservation. PLOS ONE 9:e88349. DOI: 10.1371/journal.pone.0088349.
McPeek MA, Deangelis DL, Shaw RG, Moore AJ, Rausher MD, Strong DR, Ellison AM, Barrett L, Rieseberg L, Breed MD, Sullivan J, Osenberg CW, Holyoak M, Elgar MA. 2009. The golden rule of reviewing. American Naturalist 173:E155–E158. DOI: 10.1086/598847.
Measey GJ, Vences M, Drewes RC, Chiari Y, Melo M, Bourles B. 2007. Freshwater paths across the ocean: Molecular phylogeny of the frog Ptychadena Newtoni gives insights into amphibian colonization of oceanic islands. Journal of Biogeography 34:7–20. DOI: 10.1111/j.1365-2699.2006.01589.x.
Mills MGL. 1992. A Comparison of Methods Used to Study Food Habits of Large African Carnivores. In: McCullough DR, Barrett RH eds. Wildlife 2001: Populations. Dordrecht: Springer Netherlands, 1112–1124. DOI: 10.1007/978-94-011-2868-1_85.
Navas CA. 1996a. The effect of temperature on the vocal activity of tropical anurans: A comparison of high and low-elevation species. Journal of Herpetology 30:488–497. DOI: 10.2307/1565691.
Navas CA. 1996b. Thermal dependency of field locomotor and vocal performance of high-elevation anurans in the tropical Andes. Journal of Herpetology 30:478–487. DOI: 10.2307/1565690.
Navas CA. 1996c. Metabolic physiology, locomotor performance, and thermal niche breadth in Neotropical anurans. Physiological Zoology 69:1481–1501. DOI: 10.1086/physzool.69.6.30164271.
Navas CA. 1996d. Implications of microhabitat selection and patterns of activity on the thermal ecology of high elevation neotropical anurans. Oecologia 108:617–626. DOI: 10.1007/BF00329034.
Niedziałkowska M, Hayward MW, Borowik T, Jędrzejewski W, Jędrzejewska B. 2019. A meta-analysis of ungulate predation and prey selection by the brown bear Ursus Arctos in Eurasia. Mammal Research 64:1–9. DOI: 10.1007/s13364-018-0396-7.
Quiggin J. Sun, 05/06/2012 - 12:00. Zombie Economics.
Roxburgh SH, Chesson P. 1998. A new method for detecting species associations with spatially autocorrelated data. Ecology 79:2180–2192. DOI: 10.1890/0012-9658(1998)079[2180:ANMFDS]2.0.CO;2.
Ryo M, Jeschke JM, Rillig MC, Heger T. 2020. Machine learning with the hierarchy-of-hypotheses (HoH) approach discovers novel pattern in studies on biological invasions. Research Synthesis Methods 11:66–73. DOI: 10.1002/jrsm.1363.
Strayer DL. 1983. The effects of surface geology and stream size on Freshwater mussel (Bivalvia, Unionidae) distribution in southeastern Michigan, U.S.A. Freshwater Biology 13:253–264. DOI: 10.1111/j.1365-2427.1983.tb00675.x.
Strayer DL. 1999. Use of flow refuges by unionid mussels in rivers. Journal of the North American Benthological Society 18:468–476. DOI: 10.2307/1468379.
Strayer DL. 2020. Non-native species have multiple abundance–impact curves. Ecology and Evolution 10:6833–6843. DOI: 10.1002/ece3.6364.
Strayer DL, Hattala KA, Kahnle AW. 2004. Effects of an invasive bivalve (Dreissena Polymorpha) on fish in the Hudson River estuary. Canadian Journal of Fisheries and Aquatic Sciences 61:924–941. DOI: 10.1139/f04-043.
Strayer DL, Malcom H. 2006. Long‐term demography of a zebra mussel (Dreissena Polymorpha) population. Freshwater Biology 51:117–130. DOI: 10.1111/j.1365-2427.2005.01482.x.
Strayer DL, Ralley J. 1993. Microhabitat use by an assemblage of stream-dwelling unionaceans (Bivalvia), including two rare species of Alasmidonta. Journal of the North American Benthological Society 12:247–258. DOI: 10.2307/1467459.
Taylor C, McCarthy MA, Lindenmayer DB. 2014. Nonlinear Effects of Stand Age on Fire Severity. Conservation Letters 7:355–370. DOI: 10.1111/conl.12122.
Valkenburgh BV, Hayward MW, Ripple WJ, Meloro C, Roth VL. 2016. The impact of large terrestrial carnivores on Pleistocene ecosystems. Proceedings of the National Academy of Sciences 113:862–867. DOI: 10.1073/pnas.1502554112.
Van Wilgen BW. 1982. Some effects of post-fire age on the above-ground plant biomass of Fynbos (Macchia) vegetation in South Africa. Journal of Ecology 70:217–225. DOI: 10.2307/2259874.
Vences M, Vieites DR, Glaw F, Brinkmann H, Kosuch J, Veith M, Meyer A. 2003. Multiple overseas dispersal in amphibians. Proceedings of the Royal Society of London. Series B: Biological Sciences 270:2435–2442. DOI: 10.1098/rspb.2003.2516.
Xie Y. 2016b. Bookdown: Authoring books and technical documents with R markdown. CRC Press.
Xie Y. 2016a. Bookdown: Authoring books and technical documents with R markdown. Boca Raton, Florida: Chapman; Hall/CRC.